﻿WEBVTT

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Hello, my name is Kubi.

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I'm a clinical chemistry fellow
at the University

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of Utah Department of Pathology
and at IRP laboratories.

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Today, I'm
going to talk to you about HIV diagnosis.

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So here are the objectives
for the talk today.

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We want to understand
and distinguish between HIV and Aids.

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We also want to describe
the pathophysiology of HIV infection

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and the disease progression.

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Finally we want to discuss screening
and diagnostic

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tests for HIV.

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So before we get into the presentation

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I'll talk I'll go through this case study.

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And as we go through the presentation
have this in mind.

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We'll get back to this case study.

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And based on the information
that we get from this presentation,

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we'll try and go through laboratory
testing for this patient.

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So we have a 30 year old female patient

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that has been well until approximately
six days earlier when she began to have

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a vaginal discharge followed by headache,
fatigue, sore throat and anorexia.

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On the fifth day of symptoms, she went to
an outpatient clinic in an urban area.

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On examination,
she had a vaginal discharge

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and temperature
and the remainder of the examination

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were reportedly normal.

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Patient has had multiple sexual partners

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and hasn't always used protection,
that is, condoms for intercourse.

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Patient has a history of STDs.

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Gonorrhea, syphilis
that has previously been treated

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lab screened
for gonorrhea and syphilis as negative.

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So keep that

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in mind
as we go through this presentation.

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So first we start by looking at
what HIV is.

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So HIV as an acronym
for human immunodeficiency virus.

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And this belongs to a family of viruses
that are called retroviruses.

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So retroviruses are viruses
that are able to insert

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the nucleic acid material
into the host genome.

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And these viruses
have a number of subfamilies.

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And importantly,
HIV belongs to the author.

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Retro. Very.

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And this is a reverse transcriptase
dependent virus.

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And what are reverse transcriptase enzyme.

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So the reverse transcriptase is an enzyme

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that helps to convert RNA into DNA.

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So in molecular biology
we have the central dogma where we know

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that DNA is converted to RNA

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and then RNA is translated into proteins.

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In this case we have RNA
that is going to be transcribed

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into DNA by the help of the reverse
transcriptase enzyme.

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And the HIV
also belongs to the genus lenta viruses.

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And these are slow growing viruses.

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And as we can see on here,
that is what we have highlighted there.

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And so the lenta viruses consist of the
HIV one and two which we'll look at.

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It also has the five which is the feline
immunodeficiency virus.

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And then there's E IAV which stands

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for equine infectious anemia virus.

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And it's important to note
that these viruses all do not have a cure.

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There can be therapy in the case of HIV,
as we'll

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look at as
we go through this presentation.

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And it's important to note that the HIV

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virus is transmitted
via exchange of bodily fluids.

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And so this can be blood.

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It can be via breast milk.

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You can have seminal
and vaginal secretions as well.

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So now let's look at HIV and Aids.

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So like I mentioned

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there is this treatment available for HIV.

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However there is no cure for HIV.

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And looking at the image above,

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after HIV infection, what happens

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is the HIV attacks the humans T cells

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and the HIV then hijacks the T

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cells and produces more copies of itself.

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And in doing this, it leads
to the destruction of the T cells.

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And so progressively patients
are going to have depleted T cells.

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And that is going to lead
to this immunodeficiency.

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And so Aids stands for acquired
immunodeficiency syndrome.

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And so what actually happens
when a patient has Aids.

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Like I mentioned the T cells count reduce.

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And so there is immunodeficiency.

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And so what happens is there's a lot of
opportunities opportunistic infections.

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And so these can include TB candidiasis

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and other infections that would otherwise
not affect a healthy individual.

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There can be cancers like Kaposi's
sarcoma amongst others.

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And then there can be Whiston syndrome.

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And so that is responsible
for that emaciated look that we see

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in HIV patients.

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And so this just shows
an image of a patient with with Aids.

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So now we move on to the HIV types.

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So the HIV has type one and then type two.

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And with the type one
it has a more global distribution.

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As we look at the type two we see that
it is more predominant in West Africa.

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Again the type one has passed for faster

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progression
from infection to the Aids stage.

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And then the type two
has slower progression.

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And then when we look at the plasma
viral loads,

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the type one has higher plasma
viral loads than the type two.

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And this is because the type one
replicates faster

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than the HIV type two.

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And in terms of the origin,

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it's been shown that the HIV type one
has origins from chimpanzees.

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And then the HIV type
two has origins from the manga base.

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Now we move

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on and look at the epidemiology of HIV.

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So like we mentioned
we've seen that there's HIV type

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one and then there's HIV type two.

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And so zooming in to the HIV type one

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we see here that there are various
groups under the HIV type

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one there's group
M group and group O and group and group M

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as the group that is responsible
for most of the cases that we see.

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The group N or NP are predominantly found

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in West Africa and some have been found
in just a few patients.

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And so when we look at the group
M of particular

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importance is the subtype B.

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So the subtype B is the more predominant

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subtype that we see here in the Americas.

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And so we have other subtypes
that you find in other parts of the world.

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So here we see a

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global distribution of the HIV type one.

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And so as the chart indicates
like I mentioned before,

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the subtype B as the subtype
that you see mostly in the Americas

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and other parts of the world
will see different subtypes.

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And over here
we see some recombinant types

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that are found
in other parts of the world.

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And here we take a look

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at the global statistics on HIV.

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So these are statistics
from the year 2020.

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And so here we see that there are about

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39 million individuals
that are living with HIV.

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And of these about 37.5 million adults.

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And we have about 1.5
million children under the age of 15 years

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that are living with HIV.

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And in terms of people that are acquiring

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for the year 2020, about 1.3 million
individuals acquired HIV.

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And here are the distributions.

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And so here there's about 1.2
million adults.

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And when we look
at the gender distribution,

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we have a higher proportion of males
having having new infections.

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And then in children
we have about 230,000.

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And then here
we look at deaths from HIV related causes.

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And so in 2022 there were about
a 630,000 deaths from HIV.

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And the distribution is as shown here.

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So we have about 540,000 from adults.

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And then we have
about 84,000 from children.

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And overall,

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since the beginning of the HIV pandemic,
there has been about 85.6

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million infections
since the beginning of the pandemic.

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And in terms of the death toll,
there have been about 40.4

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million Aids related deaths
since the beginning

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of the HIV pandemic.

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So now we move on to the right.

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And here we see the prevalence of HIV

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per 100,000 individuals
in the United States.

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We see that the South in the United States
has the highest prevalence.

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And so in terms of the incidence,
it's about 12.4

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per 300,000 individuals.

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We see that the West is next.

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And then we see the lowest prevalence
in the Midwest.

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There is also some racial influence.

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And the distribution with the highest
incidence of 40% of new cases

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being found in black, black Americans.

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And then that is followed by Hispanics
and then the white populations.

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And then we find that in multiracial Asian

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populations, amongst others,
the incidence is much less.

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So here
we look at the HIV virus structure.

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So the HIV virus has this outer membrane.

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And on that outer membrane
there are these proteins on the surface.

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And importantly we have the GG 41.

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We have the GP 120.

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That's
glycoprotein 120 and glycoprotein 41.

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These are proteins
that are going to help in the integration

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of the HIV virus into the host cell.

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And we'll look at that in the next slide.

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Importantly
there are also this nucleic acid

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material inside the the virus particle.

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And associated with that
we have these proteins.

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And so we have P seven.

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We have this green this green circle here

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that represents proteases
that are important in the process

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that the HIV is going to get into the cell
and get integrated.

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It's nucleic acid
integrated into the host cell.

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And these proteins

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are going to be important
when we start looking at the diagnosis.

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And so importantly
I want to highlight the GP 120 GP 41.

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That's the P 24.

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There's the reverse transcriptase that
I mentioned converts the RNA into DNA.

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And then there's integrase.

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And then the proteases
that are also important.

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So here we take a look

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at how the HIV virus actually

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integrates into the host cell.

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So the HIV virus like we mentioned
has the surface proteins.

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And importantly here we have the GP 120

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and then we have the GP 41.

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So what happens is the HIV

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gets in contact
with the CD positive T cells.

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And on the CD positive T cells

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there is this membrane
protein called the CD4.

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And so the glycoprotein 120
is able to interact

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and bind to the CD4 on the T cell.

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This causes a conformational change.

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And this causes the glycoprotein

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120 to bind to another structure.

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Another transmembrane protein
on the CD positive T cell

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that is called the CCR five
that is a core receptor.

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And once that binds, it causes
a conformational change and at allows

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the GP 41 to then fuze

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with the cell membrane
of the CD positive T cell.

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And once that fusion takes place,

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there is the integration
of the two cell membranes,

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and then a channel is created
between the HIV particle on top.

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And here we have the CD positive T cell.

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And so when that happens
it facilitates the creation of a channel

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that allows the nucleic acid
material inside the HIV

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particle
to be transferred inside the T cell.

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So now let's look at

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what actually happens
during the replication process.

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And so we've seen the mechanism
by which the HIV particle

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is going to attach to the CD4 positive
T cell.

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And we've seen that process
described in the previous slide.

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And so after that integration
then you click Acid material

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is then released into the host cell.

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Once that is released,
the reverse transcriptase enzyme

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that is a viral enzyme
helps in the conversion

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or the transcription of the RNA

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viral RNA into DNA.

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This DNA is then, with the help of host
cell proteins,

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shuttled into the nucleus of the
of the host cell

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and within the nucleus of the host cell
that viral protein, called the integrase,

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helps integrate that nucleic acid material
into the host cell genome.

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And so at this point,
we have the viral nucleic acid material

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now being convert,
having been converted into DNA

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and then integrated into the host
cell genome.

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Now after it's integrated into the host
cell genome,

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this can then be transcribed into RNA.

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This RNA is
then shuttled into the cytoplasm.

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And then there is processing of the RNA.

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The RNA can
then be be translated into proteins.

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And then within the cytoplasm of the
T cell there is viral particle assembly.

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And after the viral
particles are assembled

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then they can be

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pushed out of the of the host cell.

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And so they bat out of the host cell.

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And once they are released,
certain proteases can act on the T cell.

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And this results in maturation.

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And so after it matures it can go on

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and infect other T cells.

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00:16:04.166 --> 00:16:07.133
And as this process goes on and hijacks

247
00:16:07.133 --> 00:16:10.500
the T cell mCAT, the T the T cell.

248
00:16:10.816 --> 00:16:14.816
And that's leads
to eventual destruction of the T cells.

249
00:16:17.033 --> 00:16:17.750
So now we

250
00:16:17.750 --> 00:16:21.000
move on to the HIV infection timeline.

251
00:16:21.500 --> 00:16:24.500
And so here looking at this graph

252
00:16:25.283 --> 00:16:28.616
here we look at the the lines on here

253
00:16:28.700 --> 00:16:33.116
are going to represent
the viral particles presence.

254
00:16:33.900 --> 00:16:36.416
And so here we have a very low amount

255
00:16:36.416 --> 00:16:39.600
of the viral particles
at the beginning of the infection.

256
00:16:39.866 --> 00:16:43.733
And so this phase
where the viral particles are very low

257
00:16:44.066 --> 00:16:46.216
that is called the eclipse phase.

258
00:16:46.216 --> 00:16:49.466
And at this phase there are no markers

259
00:16:49.466 --> 00:16:52.666
that are present at appreciable levels

260
00:16:52.850 --> 00:16:55.966
that can be detected to diagnose HIV.

261
00:16:56.416 --> 00:17:01.066
And so in this in this phase
that is the eclipse phase, we do not have

262
00:17:01.066 --> 00:17:04.766
the markers present at those
at high levels enough to diagnose.

263
00:17:05.366 --> 00:17:08.483
And then we enter what we call the acute
phase.

264
00:17:08.933 --> 00:17:12.116
During the acute phase
a patient may show symptoms.

265
00:17:12.300 --> 00:17:14.450
And some of the symptoms are outlined

266
00:17:14.450 --> 00:17:17.866
on the left here
and some others are shown on here.

267
00:17:18.316 --> 00:17:23.933
And so here that is the first point
where markers can be detected in blood.

268
00:17:24.466 --> 00:17:27.316
And it's important to note that

269
00:17:27.316 --> 00:17:32.033
because of these symptoms, patients
at that stage may seek medical help.

270
00:17:32.816 --> 00:17:36.416
And then beyond the acute phase

271
00:17:36.566 --> 00:17:39.566
you enter this chronic phase.

272
00:17:39.983 --> 00:17:41.416
And so there's this period

273
00:17:41.416 --> 00:17:44.866
between the acute and the chronic
where there are no symptoms.

274
00:17:45.233 --> 00:17:48.250
And for the most part
during the chronic phase there are no

275
00:17:48.266 --> 00:17:53.333
there are no symptoms until the disease
progresses to the to the aid stage.

276
00:17:53.450 --> 00:17:58.200
And so what happens during the this
this phase that we are seeing here

277
00:17:58.616 --> 00:18:03.116
is that you have that process
that we looked at in the previous slide

278
00:18:03.116 --> 00:18:08.900
going on the HIV virus
as continuously getting into the T cells.

279
00:18:09.200 --> 00:18:12.200
More HIV particles are being produced.

280
00:18:12.200 --> 00:18:14.966
And then the viral counts are going up.

281
00:18:14.966 --> 00:18:19.100
And then the CD4 positive
T cell counts are going down.

282
00:18:19.516 --> 00:18:23.250
And so here you have that progression
increasing an increase

283
00:18:23.250 --> 00:18:24.950
in the viral particles.

284
00:18:24.950 --> 00:18:30.766
And depending on the type of HIV infection
that you have what we call

285
00:18:30.766 --> 00:18:34.333
the set point,
that is the background virus

286
00:18:34.350 --> 00:18:37.700
particle levels is going to vary.

287
00:18:37.950 --> 00:18:40.966
And so for HIV one that we saw has

288
00:18:41.216 --> 00:18:44.516
a higher replication rate
as compared to HIV two.

289
00:18:44.716 --> 00:18:49.283
The set point is going to be much
higher for the HIV type one.

290
00:18:51.450 --> 00:18:52.166
So now we

291
00:18:52.166 --> 00:18:55.166
move on to look at the care cascade.

292
00:18:55.200 --> 00:18:58.500
So as Laboratorios we are responsible

293
00:18:58.500 --> 00:19:02.116
for helping diagnose the HIV infection.

294
00:19:02.450 --> 00:19:06.266
And that is critical
because until a patient is diagnosed

295
00:19:06.266 --> 00:19:09.266
with HIV, they cannot seek care.

296
00:19:10.300 --> 00:19:10.733
Okay.

297
00:19:10.733 --> 00:19:15.983
And so that is a very vital stage
in the care cascade for HIV.

298
00:19:16.250 --> 00:19:18.983
And so after the HIV is diagnosed

299
00:19:18.983 --> 00:19:23.116
then there is the opportunity
for the patient to start treatment.

300
00:19:23.450 --> 00:19:27.916
And as the as the as the cycle shows,

301
00:19:28.066 --> 00:19:31.350
it's important
that the medication as it had to.

302
00:19:31.733 --> 00:19:35.250
And then it's important
that they continuously seek

303
00:19:35.750 --> 00:19:39.116
medical care
and that they are continuously

304
00:19:39.116 --> 00:19:42.116
monitored.

305
00:19:42.316 --> 00:19:44.150
So now let us look at

306
00:19:44.150 --> 00:19:47.150
screening guidelines for HIV.

307
00:19:47.150 --> 00:19:50.450
So here we look at two
two recommendations.

308
00:19:50.450 --> 00:19:53.450
The first recommendation
is recommendation from the CDC.

309
00:19:53.933 --> 00:19:57.866
And this is endorsed by other associations

310
00:19:57.866 --> 00:20:02.416
like the American Academy for Family
Physicians amongst others.

311
00:20:02.750 --> 00:20:07.283
And so the they recommend
testing in individuals

312
00:20:07.816 --> 00:20:11.300
between the ages of 13 and 64 years.

313
00:20:11.633 --> 00:20:14.300
They also recommend testing

314
00:20:14.300 --> 00:20:18.266
and patients
that are particularly at high risk

315
00:20:18.683 --> 00:20:21.683
and also in pregnant individuals.

316
00:20:22.066 --> 00:20:25.066
And then the United States

317
00:20:25.066 --> 00:20:29.416
Preventive Services
Task Force also has these recommendations.

318
00:20:29.416 --> 00:20:30.233
And you'll notice that

319
00:20:30.233 --> 00:20:34.250
the recommendations that we have here are
somewhat similar to what we have above.

320
00:20:34.500 --> 00:20:38.150
Just that the age
the age brackets are slightly different.

321
00:20:38.400 --> 00:20:42.016
And so for all individuals,
the recommendation is to test for

322
00:20:42.450 --> 00:20:45.916
individuals between 15 and 65.

323
00:20:46.350 --> 00:20:50.966
And then for individuals that are at risk
are the at high risk

324
00:20:51.116 --> 00:20:55.200
that are less than the age of 15
or greater than the age of 65.

325
00:20:55.466 --> 00:20:58.050
Then testing is also recommended.

326
00:20:58.050 --> 00:21:03.233
And then for pregnant immune individuals,
testing is recommended, including testing

327
00:21:03.233 --> 00:21:06.833
for individuals that show up at the labor

328
00:21:07.016 --> 00:21:10.016
ward with unknown HIV status.

329
00:21:12.950 --> 00:21:16.283
So here,
before we go into the diagnostics,

330
00:21:16.433 --> 00:21:19.516
we again look at the HIV particle.

331
00:21:19.800 --> 00:21:24.266
And importantly, that these glycoproteins
that are on the surface,

332
00:21:24.566 --> 00:21:29.600
there are important proteins like the p24
which forms the capsid

333
00:21:29.816 --> 00:21:35.600
that covers the all that surrounds
the viral nucleic acid material.

334
00:21:35.783 --> 00:21:38.600
And these are going to come up as we start

335
00:21:38.600 --> 00:21:42.750
looking at targets for HIV assays.

336
00:21:43.100 --> 00:21:48.233
And so importantly we'll discuss
detection of anti HIV AGM.

337
00:21:48.666 --> 00:21:52.066
We'll discuss the detection of anti
HIV IgG.

338
00:21:52.433 --> 00:21:56.866
We'll also discuss
the detection of protein the P24

339
00:21:57.233 --> 00:22:00.233
and then the viral RNA.

340
00:22:01.666 --> 00:22:04.850
So before we get into the diagnostic tests

341
00:22:05.150 --> 00:22:09.200
it's important to review the slide
and look at the markers

342
00:22:09.200 --> 00:22:13.366
and be familiar
with at what stage of the infection

343
00:22:13.366 --> 00:22:18.050
the various markers are present
and at what stage they are detectable.

344
00:22:18.566 --> 00:22:21.533
And so it's important to note that

345
00:22:21.533 --> 00:22:26.366
the other eclipse stage,
these markers that we see on the on

346
00:22:26.366 --> 00:22:30.266
the graph, are not detectable
during that eclipse phase.

347
00:22:30.800 --> 00:22:33.616
And then beyond the eclipse phase,

348
00:22:33.616 --> 00:22:37.916
the first marker
that is detectable as the viral RNA.

349
00:22:38.266 --> 00:22:42.900
And so here we see the viral RNA increase

350
00:22:42.900 --> 00:22:47.116
up to a peak here around the the 20 to 30.

351
00:22:47.300 --> 00:22:50.150
And then at reduces.

352
00:22:50.150 --> 00:22:53.366
And then the next marker
that is going to be detectable

353
00:22:53.366 --> 00:22:56.366
is going to be the P 24.

354
00:22:56.550 --> 00:22:59.633
And so the P 24
that is the capsid protein.

355
00:23:00.233 --> 00:23:05.000
And that is going to be increased
especially during the acute phase.

356
00:23:05.416 --> 00:23:10.150
And then after that acute phase
the patient starts to circumvent.

357
00:23:10.500 --> 00:23:14.600
And seroconversion
means that the patient starts producing

358
00:23:14.600 --> 00:23:17.966
antibodies against the HIV proteins

359
00:23:18.266 --> 00:23:20.966
and other components of the HIV.

360
00:23:20.966 --> 00:23:25.883
And so the first antibody that is
produced is going to be IgG.

361
00:23:26.816 --> 00:23:29.550
And further into the infection

362
00:23:29.550 --> 00:23:32.516
then IgG is going to be produced.

363
00:23:32.516 --> 00:23:36.466
And so the IgG AGM rises
and then it falls.

364
00:23:36.466 --> 00:23:42.150
And then the IgG is going to be detectable
across the infection.

365
00:23:42.983 --> 00:23:47.750
And so here looking at the timeline
and the image below.

366
00:23:48.050 --> 00:23:52.516
So you notice that the nucleic acid
as what is detectable first.

367
00:23:52.950 --> 00:23:55.616
And then we'll look at the P

368
00:23:55.616 --> 00:23:58.616
24 the IGA MiG that will be next.

369
00:23:58.916 --> 00:24:02.250
And then next you will have assays

370
00:24:02.250 --> 00:24:06.450
that are able to detect just IgG and IgG.

371
00:24:06.750 --> 00:24:11.033
And then here you have assays
that are able to detect just IgG.

372
00:24:11.333 --> 00:24:14.250
And then finally the least sensitive

373
00:24:14.250 --> 00:24:17.550
is going to be western blotting assays.

374
00:24:17.933 --> 00:24:20.000
And those are no longer recommended.

375
00:24:22.583 --> 00:24:25.950
So there have been generations of tests
for HIV.

376
00:24:25.950 --> 00:24:28.950
And I'm going to walk you
through the various iterations.

377
00:24:29.366 --> 00:24:31.850
So the first generation test

378
00:24:31.850 --> 00:24:34.850
was sensitive for IgG antibodies.

379
00:24:35.366 --> 00:24:39.683
And so here there was a viral lysate
that was immobilized

380
00:24:39.683 --> 00:24:41.700
on some solid support.

381
00:24:41.700 --> 00:24:45.750
And then you'd have the STS,
the patient sample

382
00:24:46.050 --> 00:24:50.850
that would have IgG
against those virus lysates.

383
00:24:51.166 --> 00:24:53.866
And then you would have a detection
antibody

384
00:24:53.866 --> 00:24:58.316
that would come in and form
essentially a sandwich structure.

385
00:24:58.583 --> 00:25:01.583
And then this would be labeled
with some kind of,

386
00:25:01.733 --> 00:25:05.000
transducer
that would give a measurable signal.

387
00:25:05.516 --> 00:25:08.116
And then we move on
to the second generation.

388
00:25:08.116 --> 00:25:11.933
So the second generation was
an improvement on the first generation,

389
00:25:11.933 --> 00:25:16.200
in that the second generation
was able to detect antibodies

390
00:25:16.616 --> 00:25:20.033
that are produced
against HIV one and HIV two.

391
00:25:20.366 --> 00:25:23.816
However, it's important to note here
that the second generation

392
00:25:23.816 --> 00:25:26.816
still detected only IgG.

393
00:25:27.300 --> 00:25:30.300
And then we move on
to the third generation tests.

394
00:25:30.416 --> 00:25:34.850
So the third generation tests
expanded on that IgG

395
00:25:35.366 --> 00:25:38.366
and were able to detect exams.

396
00:25:38.450 --> 00:25:41.450
And so like
we saw in the course of the infection

397
00:25:41.550 --> 00:25:46.250
exams are produced first
and then ECGs are then produced.

398
00:25:46.850 --> 00:25:51.600
And so it was an important milestone
in HIV assays.

399
00:25:52.133 --> 00:25:55.133
And then we move on to the fourth
generation tests.

400
00:25:55.250 --> 00:25:58.433
So the fourth generation test for the
was the first test

401
00:25:58.700 --> 00:26:01.666
that introduced HIV protein.

402
00:26:01.666 --> 00:26:05.550
And so in this case
the P 24 was introduced in this RC.

403
00:26:06.083 --> 00:26:10.583
And so here we are detecting both IgG AGM.

404
00:26:10.850 --> 00:26:14.366
And finally
we are also detecting the P 24.

405
00:26:14.900 --> 00:26:18.116
An important thing to note
with all these assays is

406
00:26:18.116 --> 00:26:21.750
that they were producing a single readout.

407
00:26:22.166 --> 00:26:24.483
And so in for example, the

408
00:26:26.066 --> 00:26:27.766
second to fourth generation

409
00:26:27.766 --> 00:26:31.650
where you have more than one targets
being detected.

410
00:26:31.950 --> 00:26:34.950
The readout was a single readout. So

411
00:26:35.750 --> 00:26:38.516
with a positive test,
there was no way of telling

412
00:26:38.516 --> 00:26:41.866
which of the markers
were present in the sample.

413
00:26:45.200 --> 00:26:46.850
So here we look at a table

414
00:26:46.850 --> 00:26:51.000
that summarizes
these tests that we have looked at.

415
00:26:51.600 --> 00:26:54.166
And so like we saw

416
00:26:54.166 --> 00:26:56.783
we saw in the previous slide

417
00:26:56.783 --> 00:27:01.050
we have the first we discussed the first
to the fourth generation test.

418
00:27:01.316 --> 00:27:03.500
And I'll talk about the fifth generation

419
00:27:03.500 --> 00:27:06.500
test as we move
as we move through the presentation.

420
00:27:06.833 --> 00:27:14.150
And so importantly,
the sensitivity of this RC has remained

421
00:27:14.333 --> 00:27:19.966
relatively similar across the third
to that through the fifth generation.

422
00:27:20.450 --> 00:27:23.816
And then when we look at the sensitivity,

423
00:27:24.116 --> 00:27:29.116
we've moved from about 99% up to 99.8

424
00:27:29.116 --> 00:27:32.416
and then 100%
in the fifth generation assays.

425
00:27:32.866 --> 00:27:35.966
And then when we look
at the negative window,

426
00:27:36.116 --> 00:27:39.233
this is describing that period within

427
00:27:39.233 --> 00:27:43.100
which the HIV between infection and

428
00:27:43.400 --> 00:27:46.100
and running the assay within which

429
00:27:46.100 --> 00:27:49.100
the HIV infection is undetectable.

430
00:27:49.200 --> 00:27:55.133
And so for the HIV first generation test
it was about 8 to 10 weeks.

431
00:27:55.316 --> 00:27:59.000
And we've seen a reduction in that up
to about two weeks.

432
00:27:59.366 --> 00:28:02.416
And then we discussed the targets
for these assays.

433
00:28:02.900 --> 00:28:06.950
And like we mentioned
there's a single readout for these assays.

434
00:28:07.283 --> 00:28:10.283
And then on the lower side it describes

435
00:28:10.283 --> 00:28:13.283
the the confirmation tests
for these assays.

436
00:28:13.500 --> 00:28:17.416
And so for the first generation
and then the second generation

437
00:28:17.666 --> 00:28:20.850
there was western blotting
and immunofluorescence

438
00:28:21.166 --> 00:28:25.216
and some Eliza assays
that were used as conformation assays.

439
00:28:25.700 --> 00:28:29.266
And a similar thing
as seen with the third generation.

440
00:28:29.716 --> 00:28:32.416
However
when we get to the fourth generation,

441
00:28:32.416 --> 00:28:35.416
there is a differentiation assay
that will be looking at

442
00:28:36.000 --> 00:28:39.450
that will be looking at
and that is an immuno assay

443
00:28:39.450 --> 00:28:45.150
that is used to differentiate between the
that is used to confirm the

444
00:28:45.533 --> 00:28:50.716
the diagnosis and also helps differentiate
between HIV one and HIV two.

445
00:28:51.083 --> 00:28:54.083
There can also be nucleic acid
amplification.

446
00:28:54.116 --> 00:28:59.633
And similar confirmatory tests can be seen
with the fifth generation testing.

447
00:28:59.783 --> 00:29:02.900
And we'll talk more about the fifth
generation test as we move along.

448
00:29:04.366 --> 00:29:06.116
So here we are going to look

449
00:29:06.116 --> 00:29:10.366
at some examples of the third
and then fourth generation tests.

450
00:29:10.850 --> 00:29:14.066
And so firstly we take a look
at the third generation tests.

451
00:29:14.483 --> 00:29:19.200
So with a third generation test
we are detecting IgG and then AGM.

452
00:29:19.766 --> 00:29:24.266
And so here we have a rapid test
that is the or a quick test.

453
00:29:24.600 --> 00:29:28.700
And importantly we have a patient sample
that is applied here.

454
00:29:29.250 --> 00:29:33.750
And as the patient sample is applied
it moves by capillary action.

455
00:29:34.166 --> 00:29:36.800
It interacts with these gold

456
00:29:36.800 --> 00:29:39.983
nanoparticles
that have protein A attached.

457
00:29:40.283 --> 00:29:43.950
And so protein A is going to bind to IgG

458
00:29:43.950 --> 00:29:47.033
IgG AGM antibodies in general.

459
00:29:47.450 --> 00:29:53.216
And so once that interacts
it moves on to the test line.

460
00:29:53.633 --> 00:29:56.716
Now the test line has away Biden

461
00:29:57.150 --> 00:29:59.933
conjugated with HIV peptides.

462
00:29:59.933 --> 00:30:02.816
And so if the patient has HIV

463
00:30:02.816 --> 00:30:05.816
and the patient has HIV antibodies,

464
00:30:06.116 --> 00:30:09.416
then the antibodies are going to bind to

465
00:30:09.616 --> 00:30:13.316
these HIV peptides
that are forming the test line.

466
00:30:13.733 --> 00:30:17.216
And because of the earlier interaction
with these gold particles, there's

467
00:30:17.216 --> 00:30:21.600
going to be the immobilization
of those gold particles on the test line.

468
00:30:22.016 --> 00:30:25.550
And then we move on to the control
line on the control line.

469
00:30:26.750 --> 00:30:29.000
We have anti-human antibodies.

470
00:30:29.000 --> 00:30:34.016
And so these anti-human antibodies
on the control line are going to bind the

471
00:30:34.016 --> 00:30:39.466
excess antibody gold particles
that move beyond the beyond the test line.

472
00:30:39.900 --> 00:30:42.900
And so in reading these tests

473
00:30:42.916 --> 00:30:48.000
you expect to see two bands
and positive patients.

474
00:30:48.266 --> 00:30:50.850
And then you expect to see just one band.

475
00:30:50.850 --> 00:30:55.650
That is the control band in a patient
that is negative.

476
00:30:56.000 --> 00:30:58.700
The control band must always appear.

477
00:30:58.700 --> 00:31:02.416
That says as validation for the assay.

478
00:31:04.916 --> 00:31:06.266
Now we take a look

479
00:31:06.266 --> 00:31:09.533
at the fourth generation tests.

480
00:31:10.016 --> 00:31:13.500
And so it's important to note here
that the fourth generation tests,

481
00:31:14.150 --> 00:31:18.600
both are detecting both antigens
and then antibodies.

482
00:31:19.100 --> 00:31:24.433
And so looking here we are looking
at automated systems and some examples.

483
00:31:24.450 --> 00:31:25.800
These are just examples.

484
00:31:25.800 --> 00:31:28.100
And so we have the Abbott Architects.

485
00:31:28.100 --> 00:31:30.683
We have the Siemens platform here.

486
00:31:30.683 --> 00:31:35.966
And importantly
the test time is less than 30 minutes

487
00:31:35.966 --> 00:31:41.333
for the Abbott architect platform
for the Siemens platform.

488
00:31:41.333 --> 00:31:43.400
It's less than an hour.

489
00:31:43.400 --> 00:31:46.650
The targets that are being detected
are going to be similar.

490
00:31:46.650 --> 00:31:48.466
It's a full generation test.

491
00:31:48.466 --> 00:31:53.516
So we expect that we are detecting the HIV
p24 antigen.

492
00:31:53.816 --> 00:31:58.950
And we are also detecting antibodies
for HIV one and HIV two.

493
00:31:59.700 --> 00:32:02.950
And then the sensitivities are shown here.

494
00:32:02.966 --> 00:32:06.300
And so those are those shows
similar performance.

495
00:32:06.683 --> 00:32:10.666
And then the specificities
are also similar for both platforms.

496
00:32:11.066 --> 00:32:14.783
And here we see the sample volume
requirements

497
00:32:14.783 --> 00:32:19.100
are 150 microliters
as opposed to 175 Microliters.

498
00:32:19.466 --> 00:32:24.566
And on here the detection system,
the signal readout is going to be

499
00:32:24.566 --> 00:32:30.116
a Chemin luminescent readout,
which is based on, micro particle.

500
00:32:32.850 --> 00:32:35.850
So now
we move on to the differentiation test.

501
00:32:35.850 --> 00:32:39.000
And so the differentiation test
is going to help us distinguish

502
00:32:39.000 --> 00:32:42.566
between HIV one and HIV two infection.

503
00:32:43.166 --> 00:32:45.683
And so this is a rapid test again.

504
00:32:45.683 --> 00:32:49.516
And looking here
we have a sample application part.

505
00:32:49.516 --> 00:32:51.866
We have a buffer application part.

506
00:32:51.866 --> 00:32:56.033
And again it's important to note
that this test is tested

507
00:32:56.033 --> 00:32:59.033
for antibodies in the patient sample

508
00:32:59.300 --> 00:33:02.633
against these peptides or proteins.

509
00:33:03.200 --> 00:33:06.666
And so here for HIV type one there's

510
00:33:06.683 --> 00:33:10.066
glycoprotein 41 glycoprotein one and 60.

511
00:33:10.466 --> 00:33:12.950
And then we have the p 24.

512
00:33:12.950 --> 00:33:14.633
That is the capsid protein.

513
00:33:14.633 --> 00:33:18.950
And then here we have p 31
that is a polymerase protein.

514
00:33:19.466 --> 00:33:24.516
And so for the HIV type two we have the
corresponding proteins as well.

515
00:33:24.533 --> 00:33:28.066
We have the GP 140 and GP 36.

516
00:33:28.733 --> 00:33:32.450
Now to diagnose or to confirm

517
00:33:32.450 --> 00:33:35.450
HIV one infection,

518
00:33:35.600 --> 00:33:39.866
it's important that we have antibodies
in the patient sample

519
00:33:40.250 --> 00:33:43.133
against both glycoproteins.

520
00:33:43.133 --> 00:33:49.066
The GP 160 and 41 or we have the

521
00:33:50.033 --> 00:33:53.633
we have a glycoprotein being reactive.

522
00:33:53.900 --> 00:33:57.050
And then we have either the p 31

523
00:33:57.316 --> 00:34:00.316
or P 24 being present.

524
00:34:00.983 --> 00:34:04.616
And then for HIV type two we need to see

525
00:34:04.616 --> 00:34:08.216
both the GP 36 and GP 140.

526
00:34:08.550 --> 00:34:11.550
And being reactive.

527
00:34:13.366 --> 00:34:14.750
So now let's move on

528
00:34:14.750 --> 00:34:17.933
and look at the HIV testing algorithm.

529
00:34:18.683 --> 00:34:22.016
So here the initial screen and test

530
00:34:22.466 --> 00:34:25.466
that is recommended as the

531
00:34:26.266 --> 00:34:29.466
antigen antibody combination assay.

532
00:34:29.483 --> 00:34:34.516
And so here we are
testing for the HIV one antibody.

533
00:34:34.516 --> 00:34:37.050
We are testing for the HIV two antibody.

534
00:34:37.050 --> 00:34:41.150
And then we are testing for the HIV
one P 24.

535
00:34:41.483 --> 00:34:46.650
And so if this screen is negative
then HIV infection is unlikely.

536
00:34:47.183 --> 00:34:51.416
And in situations
where an acute infection is suspected

537
00:34:51.683 --> 00:34:54.833
then nucleic acid
amplification will be recommended.

538
00:34:55.516 --> 00:34:59.850
And then we look on this other side
where we have a positive screen.

539
00:35:00.316 --> 00:35:03.833
After a positive screen
it's important that the differentiation

540
00:35:03.833 --> 00:35:07.433
assay that we just looked at on
the previous slide is run.

541
00:35:07.883 --> 00:35:10.800
And so with the differentiation assay,

542
00:35:10.800 --> 00:35:16.400
if HIV one antibodies are present
then HIV one is detected.

543
00:35:16.400 --> 00:35:19.400
That is confirmation of HIV one infection.

544
00:35:19.583 --> 00:35:23.716
If the HIV two antibodies are detected
that is confirmation.

545
00:35:24.150 --> 00:35:28.883
And then for HIV
one HIV two antibodies are detected.

546
00:35:29.183 --> 00:35:32.783
That means the patient is infected
with HIV one

547
00:35:33.466 --> 00:35:36.166
and the and HIV two.

548
00:35:36.166 --> 00:35:40.100
And then it's important
that you can also run

549
00:35:40.350 --> 00:35:45.616
nucleic acid amplification
testing to differentiate between the HIV

550
00:35:45.616 --> 00:35:49.133
one presence and the HIV two presence
that can be run as well.

551
00:35:49.583 --> 00:35:52.766
And then we move on to the extreme end

552
00:35:52.766 --> 00:35:57.000
where the differentiation
assay is indeterminate.

553
00:35:57.416 --> 00:36:00.616
And so when you have an indeterminate
differentiation assay,

554
00:36:00.983 --> 00:36:05.333
the next step would be to run
a nucleic acid amplification test.

555
00:36:05.716 --> 00:36:10.400
And if the nucleic acid
amplification test comes out as negative,

556
00:36:10.666 --> 00:36:13.650
then that would be an indication

557
00:36:13.650 --> 00:36:17.066
that the HIV infection is ruled out.

558
00:36:17.366 --> 00:36:23.150
And if the testing becomes positive
or you test positive,

559
00:36:23.416 --> 00:36:27.083
then that is an indication
of an acute infection.

560
00:36:29.783 --> 00:36:31.016
Now let's take a

561
00:36:31.016 --> 00:36:34.016
look at the fifth generation test.

562
00:36:34.050 --> 00:36:39.350
So the fifth generation test
is able to simultaneously detect

563
00:36:39.350 --> 00:36:42.466
and report a screen as well

564
00:36:42.466 --> 00:36:46.133
as three individual HIV results.

565
00:36:46.583 --> 00:36:50.866
And so we saw in the previous test
in the first generation up

566
00:36:50.866 --> 00:36:56.000
to the fourth generation testing,
we saw that there a single readout.

567
00:36:56.000 --> 00:36:58.366
So you cannot tell
whether it's the antibody

568
00:36:58.366 --> 00:37:01.816
that is present or the protein
that is present.

569
00:37:02.216 --> 00:37:05.216
However, with the fifth generation test,

570
00:37:05.216 --> 00:37:09.000
there is a readout
that gives a combined result.

571
00:37:09.383 --> 00:37:16.616
There is also individual readings
for the p24 antigen for the HIV one.

572
00:37:16.950 --> 00:37:22.200
And then we are also able to get readings
for the HIV one antibodies.

573
00:37:22.283 --> 00:37:25.283
And then HIV two antibodies.

574
00:37:25.966 --> 00:37:28.500
And so importantly this includes

575
00:37:28.500 --> 00:37:31.500
HIV v1 and V2 differentiation.

576
00:37:32.183 --> 00:37:36.416
And then there is enhanced sensitivity
for p24

577
00:37:36.416 --> 00:37:39.500
antigen detection
in the fifth generation assays.

578
00:37:40.016 --> 00:37:44.300
And so as we see in the image
here it is a beat up system.

579
00:37:44.550 --> 00:37:47.850
And this is going to be a fluorescence
based system.

580
00:37:48.200 --> 00:37:53.066
And so there is going to be a different
signal for each of these beads.

581
00:37:53.450 --> 00:37:58.950
And each bead is coated with ligands
that are going to help

582
00:37:59.183 --> 00:38:03.350
to detect
the individual individual targets.

583
00:38:03.383 --> 00:38:07.666
And so in this case as we
look at these blue blue beads here,

584
00:38:07.800 --> 00:38:11.066
these are going to help in the detection
or facilitate

585
00:38:11.066 --> 00:38:15.600
the detection of HIV
one group M antibodies.

586
00:38:15.916 --> 00:38:21.150
And then as we move on
we see HIV group all antibodies.

587
00:38:21.150 --> 00:38:24.316
We see these beads
that are going to be helpful

588
00:38:24.316 --> 00:38:28.650
in detecting the HIV p24 antigen.

589
00:38:28.766 --> 00:38:34.133
And then we have beads that are going
to help in detecting HIV to antibodies.

590
00:38:34.400 --> 00:38:39.466
And so we have individual readouts
that are being given by these beads.

591
00:38:39.716 --> 00:38:43.100
And that's the advantage
of the fifth generation test.

592
00:38:46.166 --> 00:38:46.916
So here

593
00:38:46.916 --> 00:38:50.666
we look
at test and in particular populations.

594
00:38:50.666 --> 00:38:53.666
And particularly
we are interested in infants here.

595
00:38:54.300 --> 00:38:57.300
So for newborn babies

596
00:38:57.466 --> 00:39:00.466
there can be the transfer of antibodies

597
00:39:00.716 --> 00:39:04.583
from the pregnant mother into the fetus.

598
00:39:04.766 --> 00:39:07.733
And so when the baby is born the baby

599
00:39:07.733 --> 00:39:11.150
then carries antibodies to the HIV.

600
00:39:11.816 --> 00:39:14.816
And how does this affect testing.

601
00:39:15.000 --> 00:39:18.233
If the baby has antibodies to the HIV,

602
00:39:18.600 --> 00:39:23.600
then the baby is going to test
positive on the screens,

603
00:39:23.866 --> 00:39:28.516
even though the baby
might not have HIV infection.

604
00:39:28.883 --> 00:39:32.866
And so for infants
that are in this category,

605
00:39:33.083 --> 00:39:37.916
it's important that nucleic acid
amplification testing be done.

606
00:39:38.266 --> 00:39:40.950
And it is recommended
that this kind of testing

607
00:39:40.950 --> 00:39:43.966
be done for the first 18 months of life.

608
00:39:44.333 --> 00:39:47.566
And so the test and recommendation
is to test at birth.

609
00:39:48.050 --> 00:39:53.633
Test again at six weeks,
and then test again at 4 to 6 months.

610
00:39:54.083 --> 00:39:57.083
And if all these tests are negative,

611
00:39:57.266 --> 00:40:00.450
then prophylaxis can be discontinued.

612
00:40:03.383 --> 00:40:04.350
So now we move

613
00:40:04.350 --> 00:40:07.583
over to look at the nucleic acid
amplification test.

614
00:40:07.583 --> 00:40:10.700
And we've seen that being mentioned
in the previous slide.

615
00:40:10.700 --> 00:40:13.700
So we are going to
shed some light on that.

616
00:40:13.883 --> 00:40:16.616
And so as we saw in the algorithm

617
00:40:16.616 --> 00:40:21.200
it can be used at the third
step of the HIV test an algorithm.

618
00:40:21.566 --> 00:40:26.266
And it is particularly important
for the diagnosis of acute HIV infection.

619
00:40:26.866 --> 00:40:29.783
And since this is a quantitative test

620
00:40:29.783 --> 00:40:33.350
it can help
in the monitoring of viral loads.

621
00:40:34.016 --> 00:40:37.100
So here we see an example of a test kit.

622
00:40:37.316 --> 00:40:41.066
So this is the Optima
HIV one quantitative kit.

623
00:40:41.416 --> 00:40:46.050
And so here it detects
HIV RNA from group M

624
00:40:47.366 --> 00:40:50.550
group N and group O of the HIV one.

625
00:40:51.016 --> 00:40:57.616
And just some statistics or some numerical
on the on the test performance.

626
00:40:57.833 --> 00:41:02.550
So we see the limit of detection
as being 17 copies per ML.

627
00:41:02.900 --> 00:41:07.100
And then the measuring range
is going to be 30

628
00:41:07.100 --> 00:41:10.916
to about 10 million copies per ML.

629
00:41:11.216 --> 00:41:15.500
And this is an example of a platform
that is used to run this.

630
00:41:15.500 --> 00:41:17.783
This is a Panther fusion platform.

631
00:41:19.516 --> 00:41:22.400
And for patients that are living with HIV,

632
00:41:22.400 --> 00:41:26.700
the nucleic acid amplification
testing can have some utility.

633
00:41:27.083 --> 00:41:31.066
So prior to the initiation of treatment,
it's important

634
00:41:31.066 --> 00:41:34.816
that viral load baselines be established.

635
00:41:34.816 --> 00:41:38.450
And so the nucleic acid amplification
testing is important

636
00:41:38.450 --> 00:41:41.450
for establishing
viral loads prior to therapy.

637
00:41:41.600 --> 00:41:46.400
And then viral load check in in
the course of therapy is also important.

638
00:41:46.400 --> 00:41:51.300
So viral load check every 4 to 8 weeks
after treatment initiation

639
00:41:51.566 --> 00:41:55.700
until the viral load is undetectable
as important.

640
00:41:55.966 --> 00:42:00.350
And in patients that are stable
and on antiretroviral therapy

641
00:42:00.683 --> 00:42:03.683
it's important that the viral load
be measured

642
00:42:04.283 --> 00:42:07.283
every 3 to 4 months.

643
00:42:09.683 --> 00:42:13.066
Now, after HIV diagnosis, what's next?

644
00:42:13.800 --> 00:42:19.133
It's important to gather the history,
medical history of the patient.

645
00:42:19.400 --> 00:42:24.416
It's important to perform a physical
to set a baseline health level.

646
00:42:24.900 --> 00:42:29.700
And then beyond that, it's important
to establish the HIV RNA load.

647
00:42:30.016 --> 00:42:33.750
And this is important
to monitor the therapy.

648
00:42:34.100 --> 00:42:38.816
And it's also important to do cell counts
and also determine

649
00:42:39.050 --> 00:42:42.500
the CD4 positive T lymphocyte counts.

650
00:42:42.800 --> 00:42:45.150
As we saw in the previous slides.

651
00:42:45.150 --> 00:42:49.283
Those are the cells
that are targeted by the HIV virus.

652
00:42:49.666 --> 00:42:54.683
And it's important to also do serological
testing for hepatitis.

653
00:42:54.950 --> 00:42:58.466
And in these patients
if the immune system is compromised

654
00:42:58.733 --> 00:43:02.550
then opportunistic infections
can become an issue.

655
00:43:02.566 --> 00:43:05.450
So it's important
to monitor these patients.

656
00:43:05.450 --> 00:43:10.300
And for infections
that have some kind of a therapy,

657
00:43:10.350 --> 00:43:13.433
it's important to make sure
that those are also being treated.

658
00:43:14.066 --> 00:43:16.250
And then there can be genotyping.

659
00:43:16.250 --> 00:43:19.800
Genotyping is particularly important
in identifying

660
00:43:20.183 --> 00:43:23.483
drug resistant HIV strains.

661
00:43:23.850 --> 00:43:27.466
And so this can be done to offer
that identification.

662
00:43:27.466 --> 00:43:29.633
And that can guide the therapy as well.

663
00:43:31.950 --> 00:43:34.950
So now we move on to HIV therapy.

664
00:43:35.633 --> 00:43:39.233
So the treatment of HIV is done

665
00:43:39.233 --> 00:43:42.716
with these drugs
called the antiretroviral drugs.

666
00:43:43.166 --> 00:43:46.250
And so it is termed
antiretroviral therapy.

667
00:43:46.883 --> 00:43:50.216
So the art is cocktail of drugs.

668
00:43:50.633 --> 00:43:55.816
And as we will see,
there are multiple points that these drugs

669
00:43:55.816 --> 00:43:58.283
are going to act at.

670
00:43:58.283 --> 00:44:01.950
And so the drugs are going to act
on seven major points.

671
00:44:02.250 --> 00:44:05.066
And so these are outlined on the slides.

672
00:44:05.066 --> 00:44:09.600
And so importantly the nucleoside reverse
transcriptase inhibitors

673
00:44:09.900 --> 00:44:13.466
we have the non-nuclear side
reverse transcriptase inhibitors.

674
00:44:13.883 --> 00:44:17.966
There are the protease inhibitors
amongst other others.

675
00:44:18.566 --> 00:44:21.950
And it's important to note
that the HIV medicines

676
00:44:21.950 --> 00:44:24.950
are going to prevent HIV replication.

677
00:44:25.400 --> 00:44:28.133
If we are preventing HIV replication,

678
00:44:28.133 --> 00:44:31.350
it means that
we are reducing the viral loads.

679
00:44:31.650 --> 00:44:34.016
And what does that mean for the patient?

680
00:44:34.016 --> 00:44:39.116
It means that the patient's immune system
is going to have a chance to recover.

681
00:44:39.616 --> 00:44:41.450
And recover.

682
00:44:41.450 --> 00:44:44.450
And it can also produce more CD4 cells.

683
00:44:44.783 --> 00:44:49.133
And then when these viral loads are low,

684
00:44:49.616 --> 00:44:52.733
it also reduces the chances
of transmission.

685
00:44:53.483 --> 00:44:56.116
And importantly for the therapy

686
00:44:56.116 --> 00:44:59.783
in the last few years there has been the

687
00:45:00.950 --> 00:45:03.233
cubby nowhere to prevent.

688
00:45:03.233 --> 00:45:05.966
And this treatment is a combination
therapy.

689
00:45:05.966 --> 00:45:09.800
This was approved as a monthly injection
in 2021,

690
00:45:10.283 --> 00:45:13.400
and in 2022 it was approved as,

691
00:45:14.066 --> 00:45:17.066
once every other month dose.

692
00:45:17.250 --> 00:45:20.850
And so this is a significant improvement

693
00:45:21.200 --> 00:45:24.716
over the daily dose dosing that patients

694
00:45:24.950 --> 00:45:27.950
previously had to do.

695
00:45:30.683 --> 00:45:31.883
Another important point

696
00:45:31.883 --> 00:45:35.250
that we want to
discuss is next generation sequencing.

697
00:45:35.700 --> 00:45:40.700
So next generation sequencing
is particularly important in identifying

698
00:45:40.700 --> 00:45:44.183
HIV genotypes that are susceptible

699
00:45:44.183 --> 00:45:47.933
to particular antiretroviral drugs.

700
00:45:48.233 --> 00:45:52.666
And so this can help identify
susceptibility to protease inhibitors,

701
00:45:52.883 --> 00:45:57.300
reverse transcriptase inhibitors
and then integrase inhibitors.

702
00:45:57.866 --> 00:46:01.250
Next generation
sequencing can also be important

703
00:46:01.500 --> 00:46:06.200
in identifying or detecting low frequency
virus populations.

704
00:46:06.833 --> 00:46:10.733
Another important advantage
of the next generation sequencing

705
00:46:10.733 --> 00:46:14.866
is that the data that is obtained
from the next generation sequencing

706
00:46:15.200 --> 00:46:18.766
can be compared to the gold standard
standard database.

707
00:46:19.216 --> 00:46:22.100
That can ensure up to date interpretation

708
00:46:22.100 --> 00:46:26.116
based on the most
recent HIV clinical trials.

709
00:46:28.583 --> 00:46:29.100
So now

710
00:46:29.100 --> 00:46:32.100
let us
look at prevention of HIV infection.

711
00:46:32.216 --> 00:46:35.900
The first thing that we look at
is pre-exposure prophylaxis.

712
00:46:36.266 --> 00:46:40.700
So pre-exposure
prophylaxis is when antiretroviral therapy

713
00:46:41.100 --> 00:46:44.783
is given to individuals
that are at particularly high

714
00:46:44.783 --> 00:46:47.783
risk of contracting HIV.

715
00:46:49.216 --> 00:46:52.316
And so there are some recommendations.

716
00:46:52.583 --> 00:46:58.816
And so the body weight
and then the sexual practices

717
00:46:58.816 --> 00:47:01.950
of the individual are important
considerations here.

718
00:47:02.266 --> 00:47:07.016
And so here if you have an individual
that is at least 35kg.

719
00:47:07.250 --> 00:47:10.950
And as they engage in anal vaginally sex
in the past six months

720
00:47:11.250 --> 00:47:13.950
that satisfy the following criteria,

721
00:47:13.950 --> 00:47:18.650
then the patient might be a candidate
for pre-exposure prophylaxis.

722
00:47:19.050 --> 00:47:24.083
And so examples include
having a sexual partner that has HIV

723
00:47:24.533 --> 00:47:27.683
and when the bacterial
sexually transmitted

724
00:47:27.900 --> 00:47:33.266
infection history in the past six months,
and then those with a history

725
00:47:33.266 --> 00:47:38.150
of inconsistent use of condoms
are also at particular risk.

726
00:47:38.333 --> 00:47:41.266
And you have other populations, like men

727
00:47:41.266 --> 00:47:44.416
who have sex with
other men, amongst others.

728
00:47:46.500 --> 00:47:48.716
And then

729
00:47:48.716 --> 00:47:50.850
we look at individuals that inject,

730
00:47:50.850 --> 00:47:55.350
inject drugs
or have a history of drug injection

731
00:47:55.350 --> 00:48:00.450
with a partner who has HIV
or who shares injection equipment.

732
00:48:00.766 --> 00:48:05.416
And so for these individuals,
it's important that pre-exposure

733
00:48:05.416 --> 00:48:08.416
prophylaxis is administered.

734
00:48:10.666 --> 00:48:14.600
And then we look at a case
where there has been exposure.

735
00:48:15.000 --> 00:48:20.000
And so here we look
at what we call post exposure prophylaxis.

736
00:48:20.450 --> 00:48:25.016
And so this means taking viral replication
blocking medication

737
00:48:25.666 --> 00:48:30.233
that prevent HIV replication
after an exposure has happened.

738
00:48:31.100 --> 00:48:34.200
And in a study
that was previously published,

739
00:48:34.916 --> 00:48:37.916
the taking of pre-exposure prophylaxis

740
00:48:38.250 --> 00:48:43.166
reduced the risk of HIV acquisition by 81%

741
00:48:43.400 --> 00:48:46.400
in returning US exposures.

742
00:48:46.400 --> 00:48:49.500
And it's important
that these kinds of treatment,

743
00:48:49.500 --> 00:48:53.116
the post-exposure prophylaxis,

744
00:48:53.266 --> 00:48:57.766
it's important that it is initiated
within two hours of exposure

745
00:48:58.766 --> 00:49:01.766
and no later than 72 hours post exposure.

746
00:49:02.266 --> 00:49:04.816
And then it's important to note

747
00:49:04.816 --> 00:49:08.416
that these regimens are safe.

748
00:49:08.900 --> 00:49:12.950
And then they have minimal side effects,
though it's important for the clinicians

749
00:49:12.950 --> 00:49:15.950
to track the side effects
of these medications.

750
00:49:16.016 --> 00:49:18.600
And it's recommended that it is

751
00:49:18.600 --> 00:49:21.716
taken for 28 days post exposure.

752
00:49:21.950 --> 00:49:24.766
And within this time,
there has to be testing to make sure

753
00:49:24.766 --> 00:49:28.016
that this patient is not testing positive.

754
00:49:29.183 --> 00:49:31.250
So now let us look at HIV

755
00:49:31.250 --> 00:49:35.100
exposure with
and without the administration of the Pep.

756
00:49:35.100 --> 00:49:38.333
That is the post exposure prophylaxis.

757
00:49:38.783 --> 00:49:44.116
And so here we are looking at pre
cutaneous or mucosal exposure of HIV.

758
00:49:44.633 --> 00:49:47.150
And so here we are
looking at the first situation

759
00:49:47.150 --> 00:49:50.216
where the Pep the Pep is not administered.

760
00:49:50.516 --> 00:49:54.166
And so when that is not administered
the viral replication is first of all

761
00:49:54.166 --> 00:49:55.200
not blocked.

762
00:49:55.200 --> 00:49:58.550
And then within 48 to 72 hours

763
00:49:58.550 --> 00:50:01.666
of exposure viral replication occurs.

764
00:50:02.183 --> 00:50:05.066
And then viremia will follow.

765
00:50:05.066 --> 00:50:09.300
And so that is within 72
to 1 20 hours of exposure.

766
00:50:09.683 --> 00:50:14.816
And then after that HIV infection
is established in the exposed individual.

767
00:50:15.116 --> 00:50:17.550
And so that kind of speaks to the fact

768
00:50:17.550 --> 00:50:20.783
that it's important
to start the Pep treatment early.

769
00:50:21.500 --> 00:50:24.916
And then in the case
where the Pep treatment is administered

770
00:50:24.916 --> 00:50:28.966
within 72 hours,
the viral replication is blocked.

771
00:50:29.366 --> 00:50:32.516
And then the HIV infection is prevented.

772
00:50:33.450 --> 00:50:35.600
And it's important to note that

773
00:50:35.600 --> 00:50:40.316
the HIV Pep treatment
should not be delayed.

774
00:50:40.516 --> 00:50:46.016
Whilst we are waiting for the source
patient's HIV status.

775
00:50:46.366 --> 00:50:52.550
And then, while the results of the expose
workers baseline HIV test, it's unknown.

776
00:50:52.550 --> 00:50:55.550
It's important to start the the

777
00:50:56.400 --> 00:50:58.616
the post-exposure prophylaxis

778
00:50:58.616 --> 00:51:03.450
and then the post-exposure
prophylaxis may be discontinued

779
00:51:03.900 --> 00:51:06.800
when the test results subsequently

780
00:51:06.800 --> 00:51:10.650
show that the source
patient does not have HIV.

781
00:51:13.316 --> 00:51:14.116
So post

782
00:51:14.116 --> 00:51:18.950
as HIV exposure testing is important.

783
00:51:18.950 --> 00:51:23.000
And that's where we,
the libertarians come into the picture.

784
00:51:23.516 --> 00:51:27.866
And so here baseline HIV testing
has to be done in the individual

785
00:51:28.250 --> 00:51:31.650
with the anti gene
antibody sensitive test.

786
00:51:31.966 --> 00:51:35.700
And like I mentioned the Pep test

787
00:51:35.700 --> 00:51:39.800
must be initiated
no longer than 72 hours post exposure.

788
00:51:40.366 --> 00:51:45.000
And after that there has to be testing
at that baseline like we mentioned.

789
00:51:45.000 --> 00:51:48.416
There has to be to be tested
at the four week period

790
00:51:48.416 --> 00:51:51.800
that has to be tested
at the 12 week period.

791
00:51:52.316 --> 00:51:55.316
And then outside the screen
and it's important that

792
00:51:56.000 --> 00:51:59.216
outside that baseline,
that there should be testing

793
00:51:59.216 --> 00:52:04.050
for general lab
testing for blood counts, renal function,

794
00:52:04.316 --> 00:52:09.116
serology for infection with hepatitis
B, hepatitis C

795
00:52:09.233 --> 00:52:12.866
and pregnancy test
and can also be indicated.

796
00:52:13.316 --> 00:52:17.183
And then it's important to note
that clinicians should continue the Pep

797
00:52:17.416 --> 00:52:20.966
and any individuals
that are suspected to be seroconversion.

798
00:52:21.416 --> 00:52:25.350
And they have to continue
the Pep treatment for individuals

799
00:52:25.616 --> 00:52:29.900
for whom the HIV has not been ruled out
even at the week four.

800
00:52:30.500 --> 00:52:33.866
And if unexposed, individual
HIV individuals

801
00:52:33.866 --> 00:52:37.400
HIV screening test result
is reactive at any time.

802
00:52:37.733 --> 00:52:40.733
It's important that the

803
00:52:40.816 --> 00:52:45.000
as the performance of the FDA
approved confirmatory test

804
00:52:45.350 --> 00:52:49.166
that as the differentiation
assay that we discussed before.

805
00:52:51.616 --> 00:52:53.150
So we go over the case

806
00:52:53.150 --> 00:52:56.666
study again
to finish up this presentation.

807
00:52:57.166 --> 00:53:00.166
So here we have a 30 year old black female

808
00:53:00.416 --> 00:53:04.216
that has been unwell
until approximately seven days earlier.

809
00:53:04.766 --> 00:53:08.366
And then she began to have some symptoms
like vaginal discharge

810
00:53:08.366 --> 00:53:12.616
followed by a headache, fatigue,
sore throat and anorexia.

811
00:53:12.950 --> 00:53:17.116
On the fifth day of symptoms, she went to
an outpatient clinic in an urban area.

812
00:53:17.450 --> 00:53:20.450
On examination,
she had a vaginal discharge and the

813
00:53:20.483 --> 00:53:24.950
and temperature and remainder of
the examination was reportedly normal.

814
00:53:25.466 --> 00:53:28.466
Patient has had multiple sexual partners

815
00:53:28.466 --> 00:53:31.466
and hasn't always used protection
for intercourse.

816
00:53:31.800 --> 00:53:35.783
And patient has a history of STDs,
gonorrhea and syphilis

817
00:53:36.150 --> 00:53:39.116
that has previously been treated
and labs screened

818
00:53:39.116 --> 00:53:42.116
for gonorrhea
and syphilis, where negative.

819
00:53:43.400 --> 00:53:45.900
So what would be the next course of action

820
00:53:45.900 --> 00:53:48.900
if HIV is suspected?

821
00:53:49.100 --> 00:53:53.150
The next course would be to run
a fourth generation test

822
00:53:53.150 --> 00:53:57.016
that is going to be sensitive
for both the P24

823
00:53:57.116 --> 00:54:00.983
and then the HIV one HIV two antibodies.

824
00:54:01.366 --> 00:54:05.300
And so here as the fourth generation
lab test was run,

825
00:54:05.866 --> 00:54:11.116
and then the laboratory test
came back as positive.

826
00:54:11.366 --> 00:54:15.116
And so after the performance
of the fourth generation testing

827
00:54:15.300 --> 00:54:19.500
that comes out positive,
what is going to be the next step?

828
00:54:20.100 --> 00:54:23.783
The next step is going to be
the differentiation assay.

829
00:54:23.783 --> 00:54:26.783
That's going to be the genius
differentiation assay

830
00:54:27.016 --> 00:54:28.616
that can be performed.

831
00:54:28.616 --> 00:54:32.550
And in this case
we end up having the HIV one

832
00:54:32.550 --> 00:54:36.300
being positive
and then the HIV two being negative.

833
00:54:36.716 --> 00:54:40.650
And so this combination of screen
and differentiation

834
00:54:41.000 --> 00:54:46.466
I see it's going to be confirmatory
for HIV one infection.

835
00:54:49.166 --> 00:54:49.700
And then

836
00:54:49.700 --> 00:54:52.766
importantly
what would be the next course of action.

837
00:54:52.950 --> 00:54:57.566
So the next course of action
as to establish care for this patient,

838
00:54:58.016 --> 00:55:00.983
it's important
to establish the viral loads.

839
00:55:00.983 --> 00:55:03.983
It's important to get the health history

840
00:55:04.366 --> 00:55:09.450
and do all those labs that we spoke about
in the course of this presentation.

841
00:55:09.750 --> 00:55:14.533
And it's also important
that the viral load be established.

842
00:55:14.550 --> 00:55:17.550
And then treatment be initiated.

843
00:55:19.250 --> 00:55:21.300
And so to wrap up, we look at progress

844
00:55:21.300 --> 00:55:24.800
that we've made with HIV management
over the years.

845
00:55:25.100 --> 00:55:27.983
And so here we look at from a time

846
00:55:27.983 --> 00:55:31.500
from the early 90s to 2019.

847
00:55:31.916 --> 00:55:35.250
And so here we look
at this line on the bottom.

848
00:55:35.566 --> 00:55:39.050
And so the line on the bottom here
just shows HIV deaths.

849
00:55:39.316 --> 00:55:43.433
And so you notice that from 1990 up
until the mid 2000,

850
00:55:43.616 --> 00:55:47.116
there was an increase
exponential increase in the death rate.

851
00:55:47.700 --> 00:55:51.866
But then from the 2000, mid 2000

852
00:55:52.133 --> 00:55:55.050
there was a reduction in the death rate.

853
00:55:55.050 --> 00:55:58.966
And this is primarily due
to the introduction

854
00:55:58.966 --> 00:56:01.966
of these anti antiretroviral therapies.

855
00:56:02.483 --> 00:56:04.850
And then when we look
at the number of people

856
00:56:04.850 --> 00:56:08.333
that are living with HIV, then we see that

857
00:56:08.666 --> 00:56:12.983
the number of people living with HIV
has increased over the years.

858
00:56:13.433 --> 00:56:17.716
But then the the rates
kind of reduced here in the 2000.

859
00:56:18.233 --> 00:56:23.366
And then the last line, the green line,
that is the new infections.

860
00:56:23.700 --> 00:56:26.600
And so here it was increase in but

861
00:56:26.600 --> 00:56:31.500
with education and and and getting people

862
00:56:31.500 --> 00:56:35.600
to be aware of things
to do to prevent infection.

863
00:56:36.000 --> 00:56:39.800
Then the rate of new cases
has continuously dropped.

864
00:56:40.050 --> 00:56:43.016
And so there has been important progress
in the management

865
00:56:43.016 --> 00:56:46.666
of patients living with HIV. And so

866
00:56:47.900 --> 00:56:50.900
that that has been a win over the years.

867
00:56:51.416 --> 00:56:56.116
And then to wrap up,
we look at the end in the HIV epidemic.

868
00:56:56.850 --> 00:57:01.666
And so here it's an initiative
that the CDC has in place

869
00:57:01.883 --> 00:57:04.816
that is aiming to reduce HIV.

870
00:57:04.816 --> 00:57:09.683
New infections by 75% by 2025

871
00:57:09.833 --> 00:57:12.833
and by 90% in 2030.

872
00:57:13.066 --> 00:57:15.950
And this is a multifaceted approach.

873
00:57:15.950 --> 00:57:21.566
There is a diagnostic approach
where the goal is to diagnose people

874
00:57:21.566 --> 00:57:25.766
that are living with HIV,
and this gets these patients to get

875
00:57:25.766 --> 00:57:30.016
into therapy and to treat these patients
that are diagnosed.

876
00:57:30.316 --> 00:57:34.050
There's the education and also prevent

877
00:57:34.050 --> 00:57:39.050
an HIV infection
with Prep and other other avenues.

878
00:57:39.266 --> 00:57:41.716
And then finally there is the response.

879
00:57:41.716 --> 00:57:46.666
And so when there is an HIV hotspot,
then there is the response

880
00:57:46.666 --> 00:57:51.716
to rapidly respond
to that and contain the outbreak.

881
00:57:54.233 --> 00:57:55.016
And with that,

882
00:57:55.016 --> 00:57:58.216
I thank you for staying with me
through this presentation.

883
00:57:58.850 --> 00:57:59.466
Thank you.
